Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 GPAA1P2-202ENST00000606848 1787 ntBASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TTC9CQ8N5M4 LINC01144-201ENST00000626198 1710 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 CICP6-201ENST00000457191 2729 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AC006449.5-201ENST00000610658 2098 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 HMGA1P7-201ENST00000406908 502 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 IGLL3P-201ENST00000412472 434 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AC021097.1-201ENST00000607902 574 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AC126755.1-201ENST00000525846 6405 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 AC068418.2-201ENST00000577309 3703 ntBASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TTC9CQ8N5M4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 PMS2P4-201ENST00000412466 1052 ntBASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 RPL13AP23-201ENST00000480739 586 ntBASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TTC9CQ8N5M4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms