Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SIX5Q8N196 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 PRORSD1P-202ENST00000563365 2154 ntBASIC16.9■□□□□ 0.3
SIX5Q8N196 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.9■□□□□ 0.3
SIX5Q8N196 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.9■□□□□ 0.3
SIX5Q8N196 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 RNA5SP410-201ENST00000516285 106 ntBASIC16.9■□□□□ 0.3
SIX5Q8N196 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.9■□□□□ 0.3
SIX5Q8N196 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.9■□□□□ 0.3
SIX5Q8N196 MIR4259-201ENST00000584466 101 ntBASIC16.9■□□□□ 0.3
SIX5Q8N196 AL133215.2-201ENST00000609242 977 ntBASIC16.9■□□□□ 0.3
SIX5Q8N196 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
SIX5Q8N196 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SIX5Q8N196 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SIX5Q8N196 SLC7A15P-201ENST00000424028 1363 ntBASIC16.89■□□□□ 0.3
SIX5Q8N196 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SIX5Q8N196 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SIX5Q8N196 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 AC234783.1-201ENST00000441761 496 ntBASIC16.89■□□□□ 0.29
SIX5Q8N196 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SIX5Q8N196 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SIX5Q8N196 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 REXO1L6P-201ENST00000603433 1515 ntBASIC16.89■□□□□ 0.29
SIX5Q8N196 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.89■□□□□ 0.29
SIX5Q8N196 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SIX5Q8N196 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SIX5Q8N196 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SIX5Q8N196 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.88■□□□□ 0.29
SIX5Q8N196 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SIX5Q8N196 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.88■□□□□ 0.29
SIX5Q8N196 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SIX5Q8N196 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms