Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 PCDHB19P-201ENST00000570871 2371 ntBASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 ADH5P3-201ENST00000433842 1137 ntBASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 KRT18P34-201ENST00000488218 1270 ntBASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 LINC01144-201ENST00000626198 1710 ntBASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCUBE3Q8IX30 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC124067.4-201ENST00000519691 2379 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 KRT8P48-201ENST00000515599 1220 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 FAM86C2P-203ENST00000528684 1004 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AL135744.1-201ENST00000565098 629 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC026120.1-201ENST00000611536 926 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 AKAP8P1-201ENST00000434743 1349 ntBASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.37■□□□□ 0.37
SCUBE3Q8IX30 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AC243562.1-201ENST00000560672 389 ntBASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AL138918.1-201ENST00000568306 659 ntBASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCUBE3Q8IX30 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms