Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 FRMD8P1-201ENST00000440433 1524 ntBASIC17.82■□□□□ 0.44
HERC6Q8IVU3 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.82■□□□□ 0.44
HERC6Q8IVU3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC245100.3-201ENST00000441281 285 ntBASIC17.81■□□□□ 0.44
HERC6Q8IVU3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC055876.2-201ENST00000531834 546 ntBASIC17.81■□□□□ 0.44
HERC6Q8IVU3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC099398.1-201ENST00000567919 2776 ntBASIC17.81■□□□□ 0.44
HERC6Q8IVU3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
HERC6Q8IVU3 AC016396.2-201ENST00000562575 1417 ntBASIC17.81■□□□□ 0.44
HERC6Q8IVU3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 AC114501.2-201ENST00000439631 535 ntBASIC17.8■□□□□ 0.44
HERC6Q8IVU3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HERC6Q8IVU3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HERC6Q8IVU3 AL138688.1-201ENST00000624851 1594 ntBASIC17.79■□□□□ 0.44
HERC6Q8IVU3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms