Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 AL592424.1-201ENST00000563624 1536 ntBASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD1LQ86WJ1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 AL162727.3-201ENST00000635661 2787 ntBASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 TPM4P1-201ENST00000436100 807 ntBASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 AC079776.4-201ENST00000511039 504 ntBASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD1LQ86WJ1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD1LQ86WJ1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.39■□□□□ 0.86
CHD1LQ86WJ1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.39■□□□□ 0.85
CHD1LQ86WJ1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms