Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AL158047.1-201ENST00000445918 881 ntBASIC13.81□□□□□ -0.2
ZNF546Q86UE3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 AC109462.3-201ENST00000573934 613 ntBASIC13.81□□□□□ -0.2
ZNF546Q86UE3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 AL109954.1-202ENST00000564051 2148 ntBASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF546Q86UE3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 MIR1238-201ENST00000408483 83 ntBASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AC136621.1-201ENST00000624017 2304 ntBASIC13.8□□□□□ -0.2
ZNF546Q86UE3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZNF546Q86UE3 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.8□□□□□ -0.2
ZNF546Q86UE3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 PRORSD1P-201ENST00000295112 541 ntBASIC13.79□□□□□ -0.2
ZNF546Q86UE3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
ZNF546Q86UE3 TSPY12P-201ENST00000421279 868 ntBASIC13.79□□□□□ -0.2
ZNF546Q86UE3 AL390955.1-201ENST00000428694 934 ntBASIC13.79□□□□□ -0.2
ZNF546Q86UE3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms