Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDZRN4Q6ZMN7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 HLA-DQB2-231ENST00000435145 2026 ntBASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 AL031284.1-201ENST00000419297 478 ntBASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDZRN4Q6ZMN7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AL590627.1-203ENST00000421194 1026 ntBASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC018712.1-201ENST00000455767 687 ntBASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SCARNA2-201ENST00000458748 420 ntBASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC120114.3-201ENST00000611923 658 ntBASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC092053.1-201ENST00000605787 1936 ntBASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.11■□□□□ 0.65
PDZRN4Q6ZMN7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 AC073347.1-201ENST00000421633 2643 ntBASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PDZRN4Q6ZMN7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms