Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AC069262.1-201ENST00000539058 672 ntBASIC19.61■□□□□ 0.73
CTR9Q6PD62 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AC015911.4-201ENST00000588022 1070 ntBASIC19.61■□□□□ 0.73
CTR9Q6PD62 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 AC008677.1-201ENST00000519230 1561 ntBASIC19.6■□□□□ 0.73
CTR9Q6PD62 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CTR9Q6PD62 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CTR9Q6PD62 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 FLJ38576-201ENST00000623820 2459 ntBASIC19.59■□□□□ 0.73
CTR9Q6PD62 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 HMGN1P19-201ENST00000436976 333 ntBASIC19.59■□□□□ 0.73
CTR9Q6PD62 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.59■□□□□ 0.73
CTR9Q6PD62 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CTR9Q6PD62 AC020765.3-201ENST00000613051 740 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms