Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC103810.3-201ENST00000583567 96 ntBASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 AC005695.3-201ENST00000614522 232 ntBASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 MIR6069-201ENST00000620069 79 ntBASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
VPS13DQ5THJ4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 AC060834.1-201ENST00000443027 2032 ntBASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
VPS13DQ5THJ4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 GGT3P-204ENST00000453783 1664 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CTBP2P5-201ENST00000454986 1264 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC006538.1-201ENST00000567905 1585 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 KRT8P37-201ENST00000451609 1420 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 KRT18P64-201ENST00000434946 1219 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC026979.3-201ENST00000607315 403 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC244669.2-201ENST00000612320 853 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC009542.2-202ENST00000619004 1067 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC005229.1-201ENST00000392885 409 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CU634019.7-201ENST00000624153 1185 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 AC005252.2-201ENST00000624630 1141 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 FP236241.2-201ENST00000624906 1185 ntBASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
VPS13DQ5THJ4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
VPS13DQ5THJ4 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms