Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AF186996.4-201ENST00000467186 377 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC105339.3-201ENST00000560043 636 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC012640.2-201ENST00000561606 901 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AL356488.2-201ENST00000602755 427 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AL121912.1-201ENST00000603683 238 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC008735.5-201ENST00000623544 497 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC148477.8-201ENST00000624298 468 ntBASIC16.14■□□□□ 0.17
SGO1Q5FBB7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.14■□□□□ 0.17
SGO1Q5FBB7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 KRT8P39-201ENST00000396270 1433 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 AC107918.2-201ENST00000530817 355 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 GGTLC5P-201ENST00000617623 998 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 GGT3P-204ENST00000453783 1664 ntBASIC16.13■□□□□ 0.17
SGO1Q5FBB7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SGO1Q5FBB7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AL031731.1-201ENST00000642131 2094 ntBASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AC079781.3-201ENST00000449110 356 ntBASIC16.12■□□□□ 0.17
SGO1Q5FBB7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AC091167.2-201ENST00000579581 588 ntBASIC16.12■□□□□ 0.17
SGO1Q5FBB7 AC008667.4-201ENST00000607370 168 ntBASIC16.12■□□□□ 0.17
SGO1Q5FBB7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms