Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TSR1Q2NL82 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
TSR1Q2NL82 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TSR1Q2NL82 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TSR1Q2NL82 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 AL596087.1-201ENST00000400979 1969 ntBASIC18.22■□□□□ 0.51
TSR1Q2NL82 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TSR1Q2NL82 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TSR1Q2NL82 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 AC079776.2-201ENST00000641154 1609 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 IGHV3-47-201ENST00000425060 335 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 AC104819.1-201ENST00000504587 486 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 TPSP2-201ENST00000561760 610 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 AC074051.2-201ENST00000565115 352 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 GGT3P-204ENST00000453783 1664 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TSR1Q2NL82 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.21■□□□□ 0.51
TSR1Q2NL82 AL590787.1-201ENST00000568856 1315 ntBASIC18.21■□□□□ 0.51
TSR1Q2NL82 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSR1Q2NL82 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
TSR1Q2NL82 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
TSR1Q2NL82 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TSR1Q2NL82 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSR1Q2NL82 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.2■□□□□ 0.5
TSR1Q2NL82 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSR1Q2NL82 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TSR1Q2NL82 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.2■□□□□ 0.5
TSR1Q2NL82 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms