Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EFNB3Q15768 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.09□□□□□ -0.15
EFNB3Q15768 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.09□□□□□ -0.15
EFNB3Q15768 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
EFNB3Q15768 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
EFNB3Q15768 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
EFNB3Q15768 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
EFNB3Q15768 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
EFNB3Q15768 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.08□□□□□ -0.15
EFNB3Q15768 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNB3Q15768 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
EFNB3Q15768 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
EFNB3Q15768 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.08□□□□□ -0.15
EFNB3Q15768 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNB3Q15768 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
EFNB3Q15768 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EFNB3Q15768 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 AL512652.2-201ENST00000625156 1716 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 HLA-H-201ENST00000383620 1096 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 AC107890.1-201ENST00000422478 521 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 RARRES2P9-201ENST00000565168 469 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 AC140878.1-201ENST00000565277 250 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.08□□□□□ -0.16
EFNB3Q15768 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.08□□□□□ -0.16
EFNB3Q15768 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 AC008677.1-201ENST00000519230 1561 ntBASIC14.08□□□□□ -0.16
EFNB3Q15768 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
EFNB3Q15768 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
EFNB3Q15768 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.08□□□□□ -0.16
EFNB3Q15768 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
EFNB3Q15768 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
EFNB3Q15768 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 FAM220BP-201ENST00000377689 816 ntBASIC14.07□□□□□ -0.16
EFNB3Q15768 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNB3Q15768 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNB3Q15768 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNB3Q15768 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.07□□□□□ -0.16
EFNB3Q15768 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNB3Q15768 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 AC098859.1-201ENST00000502915 1238 ntBASIC14.07□□□□□ -0.16
EFNB3Q15768 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNB3Q15768 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.07□□□□□ -0.16
EFNB3Q15768 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 AC006538.1-201ENST00000567905 1585 ntBASIC14.07□□□□□ -0.16
EFNB3Q15768 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
EFNB3Q15768 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNB3Q15768 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
EFNB3Q15768 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.07□□□□□ -0.16
EFNB3Q15768 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
EFNB3Q15768 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
EFNB3Q15768 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms