Protein–RNA interactions for Protein: Q15223

NECTIN1, Nectin-1, humanhuman

Predictions only

Length 517 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1Q15223 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 AP000347.1-202ENST00000435868 847 ntBASIC19.55■□□□□ 0.72
NECTIN1Q15223 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 AC112191.1-201ENST00000523689 701 ntBASIC19.55■□□□□ 0.72
NECTIN1Q15223 KRT18P58-201ENST00000527480 1120 ntBASIC19.55■□□□□ 0.72
NECTIN1Q15223 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
NECTIN1Q15223 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.55■□□□□ 0.72
NECTIN1Q15223 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 MIR940-201ENST00000401276 94 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 MCCD1P2-201ENST00000423228 335 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 POLD2P1-201ENST00000511220 997 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 AC040169.1-201ENST00000565382 521 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 AL138918.1-201ENST00000568306 659 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 AC091812.2-201ENST00000619081 385 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 AC092902.6-201ENST00000641783 218 ntBASIC19.54■□□□□ 0.72
NECTIN1Q15223 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NECTIN1Q15223 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
NECTIN1Q15223 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 AL589702.1-201ENST00000641229 1509 ntBASIC19.53■□□□□ 0.72
NECTIN1Q15223 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 ADH5P3-201ENST00000433842 1137 ntBASIC19.53■□□□□ 0.72
NECTIN1Q15223 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 AC112504.1-201ENST00000623415 1841 ntBASIC19.53■□□□□ 0.72
NECTIN1Q15223 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.53■□□□□ 0.72
NECTIN1Q15223 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NECTIN1Q15223 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 AC008741.2-201ENST00000612792 3115 ntBASIC19.52■□□□□ 0.72
NECTIN1Q15223 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
NECTIN1Q15223 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NECTIN1Q15223 CDC14C-201ENST00000428251 1719 ntBASIC19.52■□□□□ 0.72
NECTIN1Q15223 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NECTIN1Q15223 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.52■□□□□ 0.72
NECTIN1Q15223 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms