Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
IRX3P78415 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.23■□□□□ 0.67
IRX3P78415 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IRX3P78415 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.23■□□□□ 0.67
IRX3P78415 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.23■□□□□ 0.67
IRX3P78415 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.23■□□□□ 0.67
IRX3P78415 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
IRX3P78415 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
IRX3P78415 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
IRX3P78415 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 AL138688.1-201ENST00000624851 1594 ntBASIC19.23■□□□□ 0.67
IRX3P78415 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.23■□□□□ 0.67
IRX3P78415 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
IRX3P78415 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 AL035456.1-201ENST00000456064 1369 ntBASIC19.22■□□□□ 0.67
IRX3P78415 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
IRX3P78415 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 RN7SL692P-201ENST00000464677 288 ntBASIC19.22■□□□□ 0.67
IRX3P78415 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.22■□□□□ 0.67
IRX3P78415 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 CR383656.12-201ENST00000549567 513 ntBASIC19.22■□□□□ 0.67
IRX3P78415 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.22■□□□□ 0.67
IRX3P78415 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
IRX3P78415 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.22■□□□□ 0.67
IRX3P78415 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IRX3P78415 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
IRX3P78415 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.21■□□□□ 0.67
IRX3P78415 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.21■□□□□ 0.67
IRX3P78415 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.21■□□□□ 0.67
IRX3P78415 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.21■□□□□ 0.67
IRX3P78415 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms