Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
ACTA1P68133 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.8□□□□□ -0.04
ACTA1P68133 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.8□□□□□ -0.04
ACTA1P68133 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.8□□□□□ -0.04
ACTA1P68133 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.8□□□□□ -0.04
ACTA1P68133 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.8□□□□□ -0.04
ACTA1P68133 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.8□□□□□ -0.04
ACTA1P68133 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
ACTA1P68133 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.8□□□□□ -0.04
ACTA1P68133 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 AL022326.1-202ENST00000641533 845 ntBASIC14.8□□□□□ -0.04
ACTA1P68133 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.8□□□□□ -0.04
ACTA1P68133 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 AC126177.1-201ENST00000547829 2218 ntBASIC14.8□□□□□ -0.04
ACTA1P68133 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.8□□□□□ -0.04
ACTA1P68133 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ACTA1P68133 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.8□□□□□ -0.04
ACTA1P68133 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ACTA1P68133 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
ACTA1P68133 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.79□□□□□ -0.04
ACTA1P68133 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ACTA1P68133 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.79□□□□□ -0.04
ACTA1P68133 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ACTA1P68133 PCED1CP-201ENST00000419887 785 ntBASIC14.79□□□□□ -0.04
ACTA1P68133 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 PAWRP1-201ENST00000451083 565 ntBASIC14.79□□□□□ -0.04
ACTA1P68133 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.79□□□□□ -0.04
ACTA1P68133 AL139424.1-201ENST00000607572 797 ntBASIC14.79□□□□□ -0.04
ACTA1P68133 AC131009.4-201ENST00000624048 1740 ntBASIC14.79□□□□□ -0.04
ACTA1P68133 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ACTA1P68133 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 AF228730.7-201ENST00000641842 219 ntBASIC14.79□□□□□ -0.04
ACTA1P68133 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ACTA1P68133 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ACTA1P68133 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ACTA1P68133 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ACTA1P68133 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.78□□□□□ -0.04
ACTA1P68133 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ACTA1P68133 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.78□□□□□ -0.04
ACTA1P68133 IER3-202ENST00000376377 1350 ntBASIC14.78□□□□□ -0.04
ACTA1P68133 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.78□□□□□ -0.04
ACTA1P68133 MIR648-201ENST00000385046 94 ntBASIC14.78□□□□□ -0.04
ACTA1P68133 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ACTA1P68133 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
ACTA1P68133 ISCU-203ENST00000431221 799 ntTSL 2 BASIC14.78□□□□□ -0.04
ACTA1P68133 AP002383.4-201ENST00000442518 975 ntBASIC14.78□□□□□ -0.04
ACTA1P68133 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms