Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.58■■□□□ 1.05
RIPK4P57078 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 AP3S2-216ENST00000617003 1561 ntBASIC21.58■■□□□ 1.05
RIPK4P57078 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.58■■□□□ 1.05
RIPK4P57078 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.58■■□□□ 1.05
RIPK4P57078 CD81-202ENST00000381036 880 ntTSL 3 BASIC21.58■■□□□ 1.05
RIPK4P57078 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC21.58■■□□□ 1.05
RIPK4P57078 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.58■■□□□ 1.05
RIPK4P57078 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.58■■□□□ 1.05
RIPK4P57078 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC21.58■■□□□ 1.05
RIPK4P57078 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 AP001059.3-201ENST00000619053 235 ntBASIC21.58■■□□□ 1.05
RIPK4P57078 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RIPK4P57078 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK4P57078 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.58■■□□□ 1.04
RIPK4P57078 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIPK4P57078 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
RIPK4P57078 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIPK4P57078 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIPK4P57078 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC21.57■■□□□ 1.04
RIPK4P57078 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
RIPK4P57078 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 PP14571-201ENST00000404327 934 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RIPK4P57078 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RIPK4P57078 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RIPK4P57078 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK4P57078 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 ME2P1-201ENST00000426028 1970 ntBASIC21.56■■□□□ 1.04
RIPK4P57078 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.56■■□□□ 1.04
RIPK4P57078 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 AC098859.1-201ENST00000502915 1238 ntBASIC21.56■■□□□ 1.04
RIPK4P57078 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 AL512356.2-201ENST00000546955 174 ntBASIC21.56■■□□□ 1.04
RIPK4P57078 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
RIPK4P57078 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.56■■□□□ 1.04
RIPK4P57078 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RIPK4P57078 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK4P57078 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RIPK4P57078 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.55■■□□□ 1.04
RIPK4P57078 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK4P57078 AL589702.1-201ENST00000641229 1509 ntBASIC21.55■■□□□ 1.04
RIPK4P57078 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK4P57078 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC21.55■■□□□ 1.04
RIPK4P57078 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.55■■□□□ 1.04
RIPK4P57078 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RIPK4P57078 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.55■■□□□ 1.04
RIPK4P57078 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RIPK4P57078 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.55■■□□□ 1.04
RIPK4P57078 AL645939.2-201ENST00000427340 991 ntBASIC21.55■■□□□ 1.04
RIPK4P57078 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.55■■□□□ 1.04
RIPK4P57078 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC21.55■■□□□ 1.04
RIPK4P57078 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.55■■□□□ 1.04
RIPK4P57078 AC025678.2-201ENST00000562061 970 ntBASIC21.55■■□□□ 1.04
RIPK4P57078 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.55■■□□□ 1.04
RIPK4P57078 Z92544.3-201ENST00000624747 417 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms