Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.61■□□□□ 0.57
EPHB4P54760 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
EPHB4P54760 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
EPHB4P54760 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
EPHB4P54760 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB4P54760 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB4P54760 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.6■□□□□ 0.57
EPHB4P54760 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB4P54760 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB4P54760 MIR4453-201ENST00000584019 89 ntBASIC18.6■□□□□ 0.57
EPHB4P54760 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.6■□□□□ 0.57
EPHB4P54760 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
EPHB4P54760 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
EPHB4P54760 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
EPHB4P54760 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB4P54760 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.6■□□□□ 0.57
EPHB4P54760 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.59■□□□□ 0.57
EPHB4P54760 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB4P54760 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB4P54760 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.59■□□□□ 0.57
EPHB4P54760 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.59■□□□□ 0.57
EPHB4P54760 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB4P54760 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.59■□□□□ 0.57
EPHB4P54760 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.59■□□□□ 0.57
EPHB4P54760 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB4P54760 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.59■□□□□ 0.57
EPHB4P54760 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
EPHB4P54760 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
EPHB4P54760 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
EPHB4P54760 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.58■□□□□ 0.57
EPHB4P54760 AC100757.3-201ENST00000622361 1406 ntBASIC18.58■□□□□ 0.57
EPHB4P54760 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
EPHB4P54760 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.58■□□□□ 0.57
EPHB4P54760 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
EPHB4P54760 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHB4P54760 DOC2GP-204ENST00000639052 2548 ntBASIC18.58■□□□□ 0.57
EPHB4P54760 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHB4P54760 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
EPHB4P54760 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.58■□□□□ 0.56
EPHB4P54760 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 AL009183.1-201ENST00000603760 355 ntBASIC18.58■□□□□ 0.56
EPHB4P54760 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 AC009118.2-201ENST00000613275 655 ntBASIC18.58■□□□□ 0.56
EPHB4P54760 MIR6799-201ENST00000620297 69 ntBASIC18.58■□□□□ 0.56
EPHB4P54760 AL590560.3-201ENST00000623350 461 ntBASIC18.58■□□□□ 0.56
EPHB4P54760 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
EPHB4P54760 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
EPHB4P54760 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.58■□□□□ 0.56
EPHB4P54760 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
EPHB4P54760 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms