Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC087641.1-201ENST00000557561 1021 ntBASIC14.59□□□□□ -0.07
CX3CR1P49238 AC105339.3-201ENST00000560043 636 ntBASIC14.59□□□□□ -0.07
CX3CR1P49238 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.59□□□□□ -0.07
CX3CR1P49238 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.59□□□□□ -0.07
CX3CR1P49238 AC005593.1-201ENST00000624894 515 ntBASIC14.59□□□□□ -0.07
CX3CR1P49238 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CX3CR1P49238 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CX3CR1P49238 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CX3CR1P49238 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.59□□□□□ -0.07
CX3CR1P49238 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.58□□□□□ -0.07
CX3CR1P49238 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CR1P49238 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CR1P49238 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.58□□□□□ -0.07
CX3CR1P49238 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CX3CR1P49238 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CX3CR1P49238 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.58□□□□□ -0.07
CX3CR1P49238 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CR1P49238 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CR1P49238 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CX3CR1P49238 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.58□□□□□ -0.07
CX3CR1P49238 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 RPS2P28-201ENST00000314255 741 ntBASIC14.58□□□□□ -0.08
CX3CR1P49238 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC018712.1-201ENST00000455767 687 ntBASIC14.58□□□□□ -0.08
CX3CR1P49238 IGHV3-65-201ENST00000523210 341 ntBASIC14.58□□□□□ -0.08
CX3CR1P49238 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.58□□□□□ -0.08
CX3CR1P49238 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 PGM5P2-202ENST00000637225 1043 ntBASIC14.58□□□□□ -0.08
CX3CR1P49238 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.58□□□□□ -0.08
CX3CR1P49238 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CX3CR1P49238 GGT4P-201ENST00000623672 1708 ntBASIC14.58□□□□□ -0.08
CX3CR1P49238 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.58□□□□□ -0.08
CX3CR1P49238 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CR1P49238 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 AP002414.3-201ENST00000589352 1468 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 AC007950.2-201ENST00000615045 2347 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.57□□□□□ -0.08
CX3CR1P49238 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CX3CR1P49238 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CX3CR1P49238 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.57□□□□□ -0.08
CX3CR1P49238 HCG4-201ENST00000418983 998 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 KRT18P67-201ENST00000432816 1264 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.57□□□□□ -0.08
CX3CR1P49238 HNRNPDP1-201ENST00000439535 754 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 DUSP5P1-201ENST00000441325 1139 ntBASIC14.57□□□□□ -0.08
CX3CR1P49238 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms