Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.23□□□□□ -0.61
CXCL5P42830 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CXCL5P42830 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 CICP13-201ENST00000422015 2789 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.22□□□□□ -0.61
CXCL5P42830 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 AC011498.5-201ENST00000592027 486 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 AL009178.2-201ENST00000597278 2719 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 AL365203.3-201ENST00000609742 2057 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CXCL5P42830 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CXCL5P42830 AC133561.5-201ENST00000635547 218 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
CXCL5P42830 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 DBET-201ENST00000630918 3363 ntBASIC11.22□□□□□ -0.61
CXCL5P42830 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CXCL5P42830 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CXCL5P42830 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 AC006277.1-201ENST00000624348 1610 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 AC073508.3-201ENST00000619697 1419 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CXCL5P42830 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.21□□□□□ -0.61
CXCL5P42830 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.21□□□□□ -0.61
CXCL5P42830 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.21□□□□□ -0.61
CXCL5P42830 NUS1P1-201ENST00000446295 882 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.21□□□□□ -0.61
CXCL5P42830 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
CXCL5P42830 Z69720.1-201ENST00000601483 472 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 AC097493.4-201ENST00000641197 219 ntBASIC11.21□□□□□ -0.61
CXCL5P42830 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.21□□□□□ -0.61
CXCL5P42830 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
CXCL5P42830 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.21□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms