Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 AC022211.2-201ENST00000585075 2527 ntBASIC18.21■□□□□ 0.51
RFC5P40937 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.21■□□□□ 0.51
RFC5P40937 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.21■□□□□ 0.51
RFC5P40937 AC051619.7-201ENST00000568314 623 ntBASIC18.21■□□□□ 0.51
RFC5P40937 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 AL589935.2-201ENST00000616471 1231 ntBASIC18.21■□□□□ 0.51
RFC5P40937 MIR6080-201ENST00000617359 66 ntBASIC18.21■□□□□ 0.51
RFC5P40937 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.21■□□□□ 0.51
RFC5P40937 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC5P40937 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RFC5P40937 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC5P40937 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RFC5P40937 TUBB3P1-201ENST00000405796 1332 ntBASIC18.21■□□□□ 0.51
RFC5P40937 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.21■□□□□ 0.51
RFC5P40937 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RFC5P40937 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
RFC5P40937 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 AC106886.4-201ENST00000623557 2502 ntBASIC18.2■□□□□ 0.5
RFC5P40937 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.2■□□□□ 0.5
RFC5P40937 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.2■□□□□ 0.5
RFC5P40937 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.2■□□□□ 0.5
RFC5P40937 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.2■□□□□ 0.5
RFC5P40937 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 AC008677.1-201ENST00000519230 1561 ntBASIC18.2■□□□□ 0.5
RFC5P40937 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC5P40937 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFC5P40937 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.2■□□□□ 0.5
RFC5P40937 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.2■□□□□ 0.5
RFC5P40937 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFC5P40937 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RFC5P40937 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFC5P40937 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFC5P40937 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.19■□□□□ 0.5
RFC5P40937 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 KLF2P3-201ENST00000451977 1087 ntBASIC18.19■□□□□ 0.5
RFC5P40937 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.19■□□□□ 0.5
RFC5P40937 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC5P40937 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC5P40937 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 AC018529.1-201ENST00000613063 361 ntBASIC18.19■□□□□ 0.5
RFC5P40937 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.19■□□□□ 0.5
RFC5P40937 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
RFC5P40937 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFC5P40937 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms