Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC004832.2-201ENST00000426397 482 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.53□□□□□ -0.24
CEACAM3P40198 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC109635.5-201ENST00000533593 962 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC020765.3-201ENST00000613051 740 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AL603756.1-201ENST00000606511 2163 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AC067930.6-201ENST00000623257 4947 ntBASIC13.53□□□□□ -0.24
CEACAM3P40198 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CEACAM3P40198 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CEACAM3P40198 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CEACAM3P40198 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.53□□□□□ -0.24
CEACAM3P40198 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CEACAM3P40198 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CEACAM3P40198 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.52□□□□□ -0.24
CEACAM3P40198 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
CEACAM3P40198 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CEACAM3P40198 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CEACAM3P40198 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CEACAM3P40198 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CEACAM3P40198 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
CEACAM3P40198 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 AC023274.1-201ENST00000418278 595 ntBASIC13.52□□□□□ -0.25
CEACAM3P40198 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.52□□□□□ -0.25
CEACAM3P40198 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.52□□□□□ -0.25
CEACAM3P40198 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.52□□□□□ -0.25
CEACAM3P40198 MIR3687-2-201ENST00000577708 61 ntBASIC13.52□□□□□ -0.25
CEACAM3P40198 AL009183.1-201ENST00000603760 355 ntBASIC13.52□□□□□ -0.25
CEACAM3P40198 MIR3687-1-201ENST00000614492 61 ntBASIC13.52□□□□□ -0.25
CEACAM3P40198 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.52□□□□□ -0.25
CEACAM3P40198 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.52□□□□□ -0.25
CEACAM3P40198 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CEACAM3P40198 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.52□□□□□ -0.25
CEACAM3P40198 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CEACAM3P40198 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CEACAM3P40198 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CEACAM3P40198 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CEACAM3P40198 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms