Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
SCNN1AP37088 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.15■□□□□ 0.34
SCNN1AP37088 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.15■□□□□ 0.34
SCNN1AP37088 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.15■□□□□ 0.34
SCNN1AP37088 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.15■□□□□ 0.34
SCNN1AP37088 AP000842.3-202ENST00000569238 1080 ntBASIC17.15■□□□□ 0.34
SCNN1AP37088 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 MIR4469-201ENST00000583919 79 ntBASIC17.15■□□□□ 0.34
SCNN1AP37088 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.15■□□□□ 0.34
SCNN1AP37088 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SCNN1AP37088 FOXO1B-201ENST00000504678 1527 ntBASIC17.15■□□□□ 0.34
SCNN1AP37088 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.15■□□□□ 0.34
SCNN1AP37088 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SCNN1AP37088 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.14■□□□□ 0.33
SCNN1AP37088 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.14■□□□□ 0.33
SCNN1AP37088 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 MIR648-201ENST00000385046 94 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.14■□□□□ 0.33
SCNN1AP37088 TIMM8BP1-201ENST00000452384 211 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SCNN1AP37088 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 AC010327.4-202ENST00000591484 748 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 AC022145.2-201ENST00000598203 171 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.14■□□□□ 0.33
SCNN1AP37088 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 SPTSSB-204ENST00000617024 1292 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SCNN1AP37088 AL596087.1-201ENST00000400979 1969 ntBASIC17.14■□□□□ 0.33
SCNN1AP37088 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SCNN1AP37088 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SCNN1AP37088 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SCNN1AP37088 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SCNN1AP37088 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.13■□□□□ 0.33
SCNN1AP37088 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.13■□□□□ 0.33
SCNN1AP37088 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.13■□□□□ 0.33
SCNN1AP37088 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 AP000344.2-201ENST00000512987 629 ntBASIC17.13■□□□□ 0.33
SCNN1AP37088 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.13■□□□□ 0.33
SCNN1AP37088 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SCNN1AP37088 MIR4321-201ENST00000592276 80 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms