Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.9□□□□□ -0.02
SOX6P35712 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SOX6P35712 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 AC097493.4-201ENST00000641197 219 ntBASIC14.9□□□□□ -0.02
SOX6P35712 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SOX6P35712 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.9□□□□□ -0.02
SOX6P35712 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
SOX6P35712 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SOX6P35712 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SOX6P35712 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.89□□□□□ -0.03
SOX6P35712 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SOX6P35712 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 LIN28AP1-201ENST00000429574 405 ntBASIC14.89□□□□□ -0.03
SOX6P35712 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.89□□□□□ -0.03
SOX6P35712 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.89□□□□□ -0.03
SOX6P35712 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 AC111152.3-201ENST00000569699 673 ntBASIC14.89□□□□□ -0.03
SOX6P35712 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.89□□□□□ -0.03
SOX6P35712 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.89□□□□□ -0.03
SOX6P35712 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.89□□□□□ -0.03
SOX6P35712 AC019129.2-201ENST00000609837 1235 ntBASIC14.89□□□□□ -0.03
SOX6P35712 AC005363.2-201ENST00000618631 242 ntBASIC14.89□□□□□ -0.03
SOX6P35712 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SOX6P35712 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SOX6P35712 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SOX6P35712 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SOX6P35712 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 AL021920.2-201ENST00000624828 1351 ntBASIC14.88□□□□□ -0.03
SOX6P35712 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.88□□□□□ -0.03
SOX6P35712 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SOX6P35712 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.88□□□□□ -0.03
SOX6P35712 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.88□□□□□ -0.03
SOX6P35712 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SOX6P35712 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.88□□□□□ -0.03
SOX6P35712 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.88□□□□□ -0.03
SOX6P35712 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SOX6P35712 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms