Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 FER1L4-210ENST00000615531 5998 ntBASIC17.09■□□□□ 0.33
PTPN7P35236 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN7P35236 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN7P35236 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.09■□□□□ 0.33
PTPN7P35236 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN7P35236 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.09■□□□□ 0.33
PTPN7P35236 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.09■□□□□ 0.33
PTPN7P35236 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN7P35236 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.09■□□□□ 0.33
PTPN7P35236 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.09■□□□□ 0.33
PTPN7P35236 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 AC069224.1-201ENST00000566372 1715 ntBASIC17.09■□□□□ 0.33
PTPN7P35236 AC112504.1-201ENST00000623415 1841 ntBASIC17.09■□□□□ 0.33
PTPN7P35236 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTPN7P35236 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.09■□□□□ 0.33
PTPN7P35236 AC008894.3-201ENST00000624324 3103 ntBASIC17.09■□□□□ 0.33
PTPN7P35236 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTPN7P35236 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PTPN7P35236 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN7P35236 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN7P35236 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN7P35236 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN7P35236 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTPN7P35236 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
PTPN7P35236 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.08■□□□□ 0.33
PTPN7P35236 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PTPN7P35236 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 IGLL3P-201ENST00000412472 434 ntBASIC17.08■□□□□ 0.32
PTPN7P35236 VN2R19P-201ENST00000442399 1052 ntBASIC17.08■□□□□ 0.32
PTPN7P35236 AP002469.2-201ENST00000531724 424 ntBASIC17.08■□□□□ 0.32
PTPN7P35236 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.08■□□□□ 0.32
PTPN7P35236 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 AC104692.2-201ENST00000603054 253 ntBASIC17.08■□□□□ 0.32
PTPN7P35236 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.08■□□□□ 0.32
PTPN7P35236 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.08■□□□□ 0.32
PTPN7P35236 AL031008.1-201ENST00000619963 541 ntBASIC17.08■□□□□ 0.32
PTPN7P35236 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTPN7P35236 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.08■□□□□ 0.32
PTPN7P35236 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN7P35236 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 CICP6-201ENST00000457191 2729 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN7P35236 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PTPN7P35236 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.07■□□□□ 0.32
PTPN7P35236 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 AC004870.1-201ENST00000315132 882 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 AL031284.1-201ENST00000419297 478 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN7P35236 AC092910.1-201ENST00000482027 1129 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 LINC02447-202ENST00000501888 2146 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN7P35236 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.07■□□□□ 0.32
PTPN7P35236 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.07■□□□□ 0.32
PTPN7P35236 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
PTPN7P35236 MIR4751-201ENST00000578027 74 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 RN7SL510P-201ENST00000581311 263 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTPN7P35236 AL049840.3-201ENST00000602669 611 ntBASIC17.07■□□□□ 0.32
PTPN7P35236 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.07■□□□□ 0.32
PTPN7P35236 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms