Protein–RNA interactions for Protein: P26583

HMGB2, High mobility group protein B2, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2P26583 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HMGB2P26583 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HMGB2P26583 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
HMGB2P26583 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HMGB2P26583 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.58■□□□□ 0.89
HMGB2P26583 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
HMGB2P26583 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGB2P26583 AC007551.1-201ENST00000457394 519 ntBASIC20.58■□□□□ 0.89
HMGB2P26583 KRT8P13-201ENST00000463294 1010 ntBASIC20.58■□□□□ 0.89
HMGB2P26583 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGB2P26583 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGB2P26583 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
HMGB2P26583 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.58■□□□□ 0.89
HMGB2P26583 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 AC010328.2-201ENST00000597698 1111 ntBASIC20.58■□□□□ 0.89
HMGB2P26583 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HMGB2P26583 AL139099.5-201ENST00000635274 300 ntBASIC20.58■□□□□ 0.89
HMGB2P26583 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.58■□□□□ 0.89
HMGB2P26583 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGB2P26583 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGB2P26583 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
HMGB2P26583 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HMGB2P26583 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HMGB2P26583 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HMGB2P26583 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.58■□□□□ 0.88
HMGB2P26583 LOX-206ENST00000639739 1626 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGB2P26583 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGB2P26583 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGB2P26583 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGB2P26583 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGB2P26583 AC016694.1-201ENST00000434179 700 ntBASIC20.57■□□□□ 0.88
HMGB2P26583 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.57■□□□□ 0.88
HMGB2P26583 FAM86LP-201ENST00000478302 853 ntBASIC20.57■□□□□ 0.88
HMGB2P26583 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.57■□□□□ 0.88
HMGB2P26583 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
HMGB2P26583 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGB2P26583 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.57■□□□□ 0.88
HMGB2P26583 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HMGB2P26583 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
HMGB2P26583 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGB2P26583 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HMGB2P26583 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
HMGB2P26583 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 GPAA1P2-201ENST00000417923 928 ntBASIC20.56■□□□□ 0.88
HMGB2P26583 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGB2P26583 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.56■□□□□ 0.88
HMGB2P26583 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGB2P26583 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.56■□□□□ 0.88
HMGB2P26583 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.56■□□□□ 0.88
HMGB2P26583 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.56■□□□□ 0.88
HMGB2P26583 AL158212.4-201ENST00000624062 1286 ntBASIC20.56■□□□□ 0.88
HMGB2P26583 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.56■□□□□ 0.88
HMGB2P26583 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HMGB2P26583 AL512652.2-201ENST00000625156 1716 ntBASIC20.56■□□□□ 0.88
HMGB2P26583 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGB2P26583 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGB2P26583 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGB2P26583 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGB2P26583 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGB2P26583 TOMM22P5-201ENST00000416399 439 ntBASIC20.55■□□□□ 0.88
HMGB2P26583 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGB2P26583 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HMGB2P26583 AP001889.1-201ENST00000525414 633 ntBASIC20.55■□□□□ 0.88
HMGB2P26583 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HMGB2P26583 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.55■□□□□ 0.88
HMGB2P26583 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.55■□□□□ 0.88
HMGB2P26583 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
HMGB2P26583 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC20.55■□□□□ 0.88
HMGB2P26583 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms