Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKCAP17252 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRKCAP17252 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.4■□□□□ 0.06
PRKCAP17252 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKCAP17252 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PRKCAP17252 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.4■□□□□ 0.06
PRKCAP17252 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PRKCAP17252 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.4■□□□□ 0.06
PRKCAP17252 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PRKCAP17252 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
PRKCAP17252 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.39■□□□□ 0.05
PRKCAP17252 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRKCAP17252 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
PRKCAP17252 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PRKCAP17252 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PRKCAP17252 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PRKCAP17252 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKCAP17252 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 TOP3BP1-201ENST00000420768 1380 ntBASIC15.38■□□□□ 0.05
PRKCAP17252 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.38■□□□□ 0.05
PRKCAP17252 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PRKCAP17252 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKCAP17252 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKCAP17252 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKCAP17252 AC107918.2-201ENST00000530817 355 ntBASIC15.38■□□□□ 0.05
PRKCAP17252 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.38■□□□□ 0.05
PRKCAP17252 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PRKCAP17252 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 IL9RP2-201ENST00000423948 1312 ntBASIC15.38■□□□□ 0.05
PRKCAP17252 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PRKCAP17252 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.38■□□□□ 0.05
PRKCAP17252 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PRKCAP17252 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.37■□□□□ 0.05
PRKCAP17252 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PRKCAP17252 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PRKCAP17252 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.37■□□□□ 0.05
PRKCAP17252 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PRKCAP17252 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms