Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CSB-PGBD3P0DP91 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 AC098850.1-201ENST00000419919 790 ntBASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.74■■□□□ 1.07
CSB-PGBD3P0DP91 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 AC234783.1-201ENST00000441761 496 ntBASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 AC099568.2-201ENST00000609194 695 ntBASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 NOC2LP1-202ENST00000452600 2235 ntBASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CSB-PGBD3P0DP91 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CSB-PGBD3P0DP91 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms