Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
FREM3P0C091 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15□□□□□ -0.01
FREM3P0C091 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 AC006277.1-201ENST00000624348 1610 ntBASIC15□□□□□ -0.01
FREM3P0C091 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
FREM3P0C091 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
FREM3P0C091 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15□□□□□ -0.01
FREM3P0C091 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
FREM3P0C091 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.99□□□□□ -0.01
FREM3P0C091 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 AL355306.1-201ENST00000415580 579 ntBASIC14.99□□□□□ -0.01
FREM3P0C091 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.99□□□□□ -0.01
FREM3P0C091 AC079140.1-201ENST00000508039 487 ntBASIC14.99□□□□□ -0.01
FREM3P0C091 LINC01225-203ENST00000563550 1244 ntBASIC14.99□□□□□ -0.01
FREM3P0C091 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 AC008267.7-201ENST00000624570 1194 ntBASIC14.99□□□□□ -0.01
FREM3P0C091 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
FREM3P0C091 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
FREM3P0C091 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 RFPL4AP1-201ENST00000530883 850 ntBASIC14.98□□□□□ -0.01
FREM3P0C091 AC140878.1-201ENST00000565277 250 ntBASIC14.98□□□□□ -0.01
FREM3P0C091 AC013467.2-201ENST00000605472 835 ntBASIC14.98□□□□□ -0.01
FREM3P0C091 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 AC008741.2-201ENST00000612792 3115 ntBASIC14.98□□□□□ -0.01
FREM3P0C091 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
FREM3P0C091 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 AC008894.3-201ENST00000624324 3103 ntBASIC14.98□□□□□ -0.01
FREM3P0C091 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
FREM3P0C091 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.98□□□□□ -0.01
FREM3P0C091 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.98□□□□□ -0.01
FREM3P0C091 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.98□□□□□ -0.01
FREM3P0C091 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.98□□□□□ -0.01
FREM3P0C091 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.98□□□□□ -0.01
FREM3P0C091 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
FREM3P0C091 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.98□□□□□ -0.01
FREM3P0C091 AC006449.5-201ENST00000610658 2098 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms