Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.79□□□□□ -0.2
CTSDP07339 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSDP07339 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 MIR648-201ENST00000385046 94 ntBASIC13.79□□□□□ -0.2
CTSDP07339 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.79□□□□□ -0.2
CTSDP07339 MIR4492-201ENST00000581627 80 ntBASIC13.79□□□□□ -0.2
CTSDP07339 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.79□□□□□ -0.2
CTSDP07339 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.79□□□□□ -0.2
CTSDP07339 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CTSDP07339 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CTSDP07339 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CTSDP07339 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CTSDP07339 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 GPAA1P2-202ENST00000606848 1787 ntBASIC13.78□□□□□ -0.2
CTSDP07339 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CTSDP07339 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSDP07339 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.78□□□□□ -0.2
CTSDP07339 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSDP07339 AP005901.3-202ENST00000581653 237 ntBASIC13.78□□□□□ -0.2
CTSDP07339 MPDU1-223ENST00000582151 728 ntBASIC13.78□□□□□ -0.2
CTSDP07339 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.78□□□□□ -0.2
CTSDP07339 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSDP07339 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.78□□□□□ -0.2
CTSDP07339 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.78□□□□□ -0.2
CTSDP07339 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CTSDP07339 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CTSDP07339 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
CTSDP07339 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
CTSDP07339 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CTSDP07339 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSDP07339 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.77□□□□□ -0.21
CTSDP07339 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.77□□□□□ -0.21
CTSDP07339 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CTSDP07339 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSDP07339 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.77□□□□□ -0.21
CTSDP07339 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.77□□□□□ -0.21
CTSDP07339 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.77□□□□□ -0.21
CTSDP07339 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CTSDP07339 AL353135.1-201ENST00000606729 504 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms