Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.38■■□□□ 1.01
COL5A2P05997 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
COL5A2P05997 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL5A2P05997 MIR1247-201ENST00000408206 136 ntBASIC21.38■■□□□ 1.01
COL5A2P05997 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.38■■□□□ 1.01
COL5A2P05997 FAM86LP-201ENST00000478302 853 ntBASIC21.38■■□□□ 1.01
COL5A2P05997 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.38■■□□□ 1.01
COL5A2P05997 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.38■■□□□ 1.01
COL5A2P05997 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.38■■□□□ 1.01
COL5A2P05997 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.38■■□□□ 1.01
COL5A2P05997 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.38■■□□□ 1.01
COL5A2P05997 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.37■■□□□ 1.01
COL5A2P05997 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
COL5A2P05997 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL5A2P05997 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 MGST3-203ENST00000367885 680 ntTSL 2 BASIC21.37■■□□□ 1.01
COL5A2P05997 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.37■■□□□ 1.01
COL5A2P05997 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.37■■□□□ 1.01
COL5A2P05997 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
COL5A2P05997 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.37■■□□□ 1.01
COL5A2P05997 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.36■■□□□ 1.01
COL5A2P05997 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.36■■□□□ 1.01
COL5A2P05997 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC21.36■■□□□ 1.01
COL5A2P05997 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.36■■□□□ 1.01
COL5A2P05997 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.36■■□□□ 1.01
COL5A2P05997 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 NME4-207ENST00000450036 985 ntTSL 3 BASIC21.36■■□□□ 1.01
COL5A2P05997 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.36■■□□□ 1.01
COL5A2P05997 AC009542.2-202ENST00000619004 1067 ntBASIC21.36■■□□□ 1.01
COL5A2P05997 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.36■■□□□ 1.01
COL5A2P05997 PP12613-201ENST00000424958 2230 ntBASIC21.36■■□□□ 1.01
COL5A2P05997 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL5A2P05997 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.36■■□□□ 1.01
COL5A2P05997 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
COL5A2P05997 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.36■■□□□ 1.01
COL5A2P05997 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC21.35■■□□□ 1.01
COL5A2P05997 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.35■■□□□ 1.01
COL5A2P05997 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.35■■□□□ 1.01
COL5A2P05997 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.35■■□□□ 1.01
COL5A2P05997 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
COL5A2P05997 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 AC007551.1-201ENST00000457394 519 ntBASIC21.35■■□□□ 1.01
COL5A2P05997 FTH1P14-201ENST00000482930 551 ntBASIC21.35■■□□□ 1.01
COL5A2P05997 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.35■■□□□ 1.01
COL5A2P05997 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.35■■□□□ 1.01
COL5A2P05997 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.35■■□□□ 1.01
COL5A2P05997 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.35■■□□□ 1.01
COL5A2P05997 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.35■■□□□ 1.01
COL5A2P05997 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL5A2P05997 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL5A2P05997 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL5A2P05997 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
COL5A2P05997 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
COL5A2P05997 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.34■■□□□ 1.01
COL5A2P05997 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL5A2P05997 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.34■■□□□ 1.01
COL5A2P05997 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC21.34■■□□□ 1.01
COL5A2P05997 PTP4A1P2-201ENST00000546033 454 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms