Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHGBP05060 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.8■□□□□ 0.76
CHGBP05060 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CHGBP05060 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHGBP05060 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CHGBP05060 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CHGBP05060 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.8■□□□□ 0.76
CHGBP05060 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.8■□□□□ 0.76
CHGBP05060 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.8■□□□□ 0.76
CHGBP05060 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.8■□□□□ 0.76
CHGBP05060 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CHGBP05060 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHGBP05060 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHGBP05060 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHGBP05060 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 PMS2P2-201ENST00000425039 1128 ntBASIC19.79■□□□□ 0.76
CHGBP05060 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHGBP05060 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
CHGBP05060 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHGBP05060 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHGBP05060 AC008677.1-201ENST00000519230 1561 ntBASIC19.78■□□□□ 0.76
CHGBP05060 AP3S2-216ENST00000617003 1561 ntBASIC19.78■□□□□ 0.76
CHGBP05060 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.78■□□□□ 0.76
CHGBP05060 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.78■□□□□ 0.76
CHGBP05060 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.78■□□□□ 0.76
CHGBP05060 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.78■□□□□ 0.76
CHGBP05060 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.78■□□□□ 0.76
CHGBP05060 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.78■□□□□ 0.76
CHGBP05060 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 AC006449.5-201ENST00000610658 2098 ntBASIC19.78■□□□□ 0.76
CHGBP05060 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CHGBP05060 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHGBP05060 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms