Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AC002310.6-201ENST00000624451 1377 ntBASIC14.95□□□□□ -0.02
HLA-DPB1P04440 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AL353593.2-201ENST00000602529 1483 ntBASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC132008.2-207ENST00000454517 770 ntBASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC091304.2-201ENST00000564639 760 ntBASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.94□□□□□ -0.02
HLA-DPB1P04440 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AL139011.1-202ENST00000642063 584 ntBASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DPB1P04440 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 AC126755.1-201ENST00000525846 6405 ntBASIC14.93□□□□□ -0.02
HLA-DPB1P04440 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DPB1P04440 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms