Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 RPS2P28-201ENST00000314255 741 ntBASIC13.91□□□□□ -0.18
GAPDHP04406 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.91□□□□□ -0.18
GAPDHP04406 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 FAM197Y8-203ENST00000450145 560 ntBASIC13.91□□□□□ -0.18
GAPDHP04406 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 AF186996.4-201ENST00000467186 377 ntBASIC13.91□□□□□ -0.18
GAPDHP04406 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.91□□□□□ -0.18
GAPDHP04406 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.91□□□□□ -0.18
GAPDHP04406 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.91□□□□□ -0.18
GAPDHP04406 AC006557.2-201ENST00000592985 1240 ntBASIC13.91□□□□□ -0.18
GAPDHP04406 AL139424.1-201ENST00000607572 797 ntBASIC13.91□□□□□ -0.18
GAPDHP04406 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.91□□□□□ -0.18
GAPDHP04406 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
GAPDHP04406 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.91□□□□□ -0.18
GAPDHP04406 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
GAPDHP04406 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.91□□□□□ -0.18
GAPDHP04406 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.91□□□□□ -0.18
GAPDHP04406 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAPDHP04406 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 LAGE3P1-201ENST00000425356 484 ntBASIC13.9□□□□□ -0.18
GAPDHP04406 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.9□□□□□ -0.18
GAPDHP04406 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.9□□□□□ -0.18
GAPDHP04406 RNPS1P1-201ENST00000507437 918 ntBASIC13.9□□□□□ -0.18
GAPDHP04406 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.9□□□□□ -0.18
GAPDHP04406 OR7E14P-202ENST00000530490 1290 ntBASIC13.9□□□□□ -0.18
GAPDHP04406 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.9□□□□□ -0.18
GAPDHP04406 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GAPDHP04406 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.9□□□□□ -0.18
GAPDHP04406 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.9□□□□□ -0.18
GAPDHP04406 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.9□□□□□ -0.18
GAPDHP04406 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAPDHP04406 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
GAPDHP04406 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
GAPDHP04406 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
GAPDHP04406 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
GAPDHP04406 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
GAPDHP04406 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
GAPDHP04406 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.9□□□□□ -0.19
GAPDHP04406 AL590787.1-201ENST00000568856 1315 ntBASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms