Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBB4AP04350 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBB4AP04350 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TUBB4AP04350 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBB4AP04350 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.77■□□□□ 0.44
TUBB4AP04350 AC010947.1-201ENST00000623454 693 ntBASIC17.77■□□□□ 0.44
TUBB4AP04350 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TUBB4AP04350 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TUBB4AP04350 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.77■□□□□ 0.44
TUBB4AP04350 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBB4AP04350 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.77■□□□□ 0.44
TUBB4AP04350 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.77■□□□□ 0.43
TUBB4AP04350 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TUBB4AP04350 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.77■□□□□ 0.43
TUBB4AP04350 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.77■□□□□ 0.43
TUBB4AP04350 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TUBB4AP04350 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB4AP04350 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB4AP04350 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB4AP04350 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB4AP04350 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.76■□□□□ 0.43
TUBB4AP04350 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 AL590326.2-201ENST00000625139 305 ntBASIC17.76■□□□□ 0.43
TUBB4AP04350 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TUBB4AP04350 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.76■□□□□ 0.43
TUBB4AP04350 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.76■□□□□ 0.43
TUBB4AP04350 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TUBB4AP04350 CYP2D8P-201ENST00000433633 1490 ntBASIC17.75■□□□□ 0.43
TUBB4AP04350 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.75■□□□□ 0.43
TUBB4AP04350 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
TUBB4AP04350 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB4AP04350 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TUBB4AP04350 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
TUBB4AP04350 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TUBB4AP04350 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB4AP04350 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TUBB4AP04350 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TUBB4AP04350 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TUBB4AP04350 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.75■□□□□ 0.43
TUBB4AP04350 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TUBB4AP04350 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms