Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AC091271.1-201ENST00000611877 1162 ntBASIC18.63■□□□□ 0.57
ALDH1A1P00352 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AC090340.1-201ENST00000620778 4980 ntBASIC18.63■□□□□ 0.57
ALDH1A1P00352 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ALDH1A1P00352 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
ALDH1A1P00352 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 DUX4L45-201ENST00000566406 1057 ntBASIC18.62■□□□□ 0.57
ALDH1A1P00352 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 RN7SL560P-201ENST00000577943 264 ntBASIC18.62■□□□□ 0.57
ALDH1A1P00352 BRI3BPP1-201ENST00000594224 787 ntBASIC18.62■□□□□ 0.57
ALDH1A1P00352 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 AL139011.1-202ENST00000642063 584 ntBASIC18.62■□□□□ 0.57
ALDH1A1P00352 AC006538.1-201ENST00000567905 1585 ntBASIC18.62■□□□□ 0.57
ALDH1A1P00352 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.62■□□□□ 0.57
ALDH1A1P00352 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ALDH1A1P00352 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 AC016694.1-201ENST00000434179 700 ntBASIC18.61■□□□□ 0.57
ALDH1A1P00352 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 C2orf69P2-201ENST00000562032 1123 ntBASIC18.61■□□□□ 0.57
ALDH1A1P00352 AL359711.2-201ENST00000563105 872 ntBASIC18.61■□□□□ 0.57
ALDH1A1P00352 AC009486.1-201ENST00000569860 813 ntBASIC18.61■□□□□ 0.57
ALDH1A1P00352 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 AL158212.4-201ENST00000624062 1286 ntBASIC18.61■□□□□ 0.57
ALDH1A1P00352 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ALDH1A1P00352 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ALDH1A1P00352 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 CALR4P-201ENST00000431943 946 ntBASIC18.6■□□□□ 0.57
ALDH1A1P00352 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 RPL13AP20-201ENST00000459725 609 ntBASIC18.6■□□□□ 0.57
ALDH1A1P00352 RPL13AP25-201ENST00000484130 612 ntBASIC18.6■□□□□ 0.57
ALDH1A1P00352 ZNF767P-206ENST00000513792 565 ntBASIC18.6■□□□□ 0.57
ALDH1A1P00352 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 FOS-206ENST00000555347 1280 ntTSL 2 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms