Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
GGPS1O95749 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GGPS1O95749 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
GGPS1O95749 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.5■□□□□ 0.55
GGPS1O95749 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 AC100757.3-201ENST00000622361 1406 ntBASIC18.5■□□□□ 0.55
GGPS1O95749 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.5■□□□□ 0.55
GGPS1O95749 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 AL353705.2-201ENST00000428243 662 ntBASIC18.5■□□□□ 0.55
GGPS1O95749 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.5■□□□□ 0.55
GGPS1O95749 RNA5SP410-201ENST00000516285 106 ntBASIC18.5■□□□□ 0.55
GGPS1O95749 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.5■□□□□ 0.55
GGPS1O95749 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
GGPS1O95749 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.5■□□□□ 0.55
GGPS1O95749 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.5■□□□□ 0.55
GGPS1O95749 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 AL138828.2-201ENST00000615812 383 ntBASIC18.5■□□□□ 0.55
GGPS1O95749 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GGPS1O95749 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
GGPS1O95749 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
GGPS1O95749 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
GGPS1O95749 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
GGPS1O95749 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
GGPS1O95749 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
GGPS1O95749 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 AC004890.2-204ENST00000481968 304 ntBASIC18.49■□□□□ 0.55
GGPS1O95749 TERF1P3-201ENST00000505638 1227 ntBASIC18.49■□□□□ 0.55
GGPS1O95749 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.49■□□□□ 0.55
GGPS1O95749 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.49■□□□□ 0.55
GGPS1O95749 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.49■□□□□ 0.55
GGPS1O95749 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.49■□□□□ 0.55
GGPS1O95749 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.49■□□□□ 0.55
GGPS1O95749 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.49■□□□□ 0.55
GGPS1O95749 AL590560.3-201ENST00000623350 461 ntBASIC18.49■□□□□ 0.55
GGPS1O95749 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 AL603756.1-201ENST00000606511 2163 ntBASIC18.49■□□□□ 0.55
GGPS1O95749 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GGPS1O95749 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
GGPS1O95749 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.49■□□□□ 0.55
GGPS1O95749 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
GGPS1O95749 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 AL031731.1-201ENST00000642131 2094 ntBASIC18.48■□□□□ 0.55
GGPS1O95749 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GGPS1O95749 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GGPS1O95749 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.48■□□□□ 0.55
GGPS1O95749 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.48■□□□□ 0.55
GGPS1O95749 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.48■□□□□ 0.55
GGPS1O95749 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.48■□□□□ 0.55
GGPS1O95749 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.48■□□□□ 0.55
GGPS1O95749 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms