Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 ALG1L8P-201ENST00000533887 760 ntBASIC13.9□□□□□ -0.18
ABCA1O95477 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.9□□□□□ -0.18
ABCA1O95477 AC008267.7-201ENST00000624570 1194 ntBASIC13.9□□□□□ -0.18
ABCA1O95477 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCA1O95477 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
ABCA1O95477 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.9□□□□□ -0.18
ABCA1O95477 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.9□□□□□ -0.18
ABCA1O95477 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ABCA1O95477 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ABCA1O95477 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
ABCA1O95477 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ABCA1O95477 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
ABCA1O95477 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.9□□□□□ -0.19
ABCA1O95477 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
ABCA1O95477 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.89□□□□□ -0.19
ABCA1O95477 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 LYSMD4-203ENST00000378904 2122 ntBASIC13.89□□□□□ -0.19
ABCA1O95477 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 AP002414.2-201ENST00000591780 3365 ntBASIC13.89□□□□□ -0.19
ABCA1O95477 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ABCA1O95477 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.89□□□□□ -0.19
ABCA1O95477 AL158211.3-201ENST00000607385 239 ntBASIC13.89□□□□□ -0.19
ABCA1O95477 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.89□□□□□ -0.19
ABCA1O95477 AC073592.8-201ENST00000624126 511 ntBASIC13.89□□□□□ -0.19
ABCA1O95477 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.89□□□□□ -0.19
ABCA1O95477 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ABCA1O95477 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ABCA1O95477 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCA1O95477 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.88□□□□□ -0.19
ABCA1O95477 AP3S2-216ENST00000617003 1561 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ABCA1O95477 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
ABCA1O95477 RNU1-129P-201ENST00000384064 167 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.88□□□□□ -0.19
ABCA1O95477 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.88□□□□□ -0.19
ABCA1O95477 U1.21-201ENST00000580816 167 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCA1O95477 AC009053.2-201ENST00000563701 2365 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 AC008741.2-201ENST00000612792 3115 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 AC133963.1-201ENST00000504166 1679 ntBASIC13.88□□□□□ -0.19
ABCA1O95477 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ABCA1O95477 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCA1O95477 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.88□□□□□ -0.19
ABCA1O95477 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ABCA1O95477 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ABCA1O95477 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ABCA1O95477 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ABCA1O95477 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.88□□□□□ -0.19
ABCA1O95477 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms