Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC015911.4-201ENST00000588022 1070 ntBASIC19.67■□□□□ 0.74
MBD4O95243 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.67■□□□□ 0.74
MBD4O95243 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.67■□□□□ 0.74
MBD4O95243 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 LINC01144-201ENST00000626198 1710 ntBASIC19.67■□□□□ 0.74
MBD4O95243 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD4O95243 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.67■□□□□ 0.74
MBD4O95243 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MBD4O95243 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 HLA-H-201ENST00000383620 1096 ntBASIC19.66■□□□□ 0.74
MBD4O95243 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.66■□□□□ 0.74
MBD4O95243 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 TUBB3P1-201ENST00000405796 1332 ntBASIC19.66■□□□□ 0.74
MBD4O95243 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.66■□□□□ 0.74
MBD4O95243 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
MBD4O95243 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
MBD4O95243 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
MBD4O95243 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MBD4O95243 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
MBD4O95243 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.65■□□□□ 0.74
MBD4O95243 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD4O95243 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD4O95243 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD4O95243 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.65■□□□□ 0.74
MBD4O95243 AC051619.7-201ENST00000568314 623 ntBASIC19.65■□□□□ 0.74
MBD4O95243 MIR4453-201ENST00000584019 89 ntBASIC19.65■□□□□ 0.74
MBD4O95243 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
MBD4O95243 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
MBD4O95243 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.65■□□□□ 0.74
MBD4O95243 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MBD4O95243 AL589702.1-201ENST00000641229 1509 ntBASIC19.65■□□□□ 0.74
MBD4O95243 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MBD4O95243 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.65■□□□□ 0.74
MBD4O95243 AC005622.1-201ENST00000636801 1703 ntBASIC19.65■□□□□ 0.74
MBD4O95243 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD4O95243 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD4O95243 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD4O95243 AC009053.2-201ENST00000563701 2365 ntBASIC19.64■□□□□ 0.74
MBD4O95243 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
MBD4O95243 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.64■□□□□ 0.73
MBD4O95243 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MBD4O95243 FAM220BP-201ENST00000377689 816 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms