Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 AL022342.1-201ENST00000400363 863 ntBASIC16.22■□□□□ 0.19
PEX1O43933 AL031284.1-201ENST00000419297 478 ntBASIC16.22■□□□□ 0.19
PEX1O43933 AC096633.1-201ENST00000422446 749 ntBASIC16.22■□□□□ 0.19
PEX1O43933 AP000347.1-202ENST00000435868 847 ntBASIC16.22■□□□□ 0.19
PEX1O43933 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.22■□□□□ 0.19
PEX1O43933 RNPS1P1-201ENST00000507437 918 ntBASIC16.22■□□□□ 0.19
PEX1O43933 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.22■□□□□ 0.19
PEX1O43933 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.22■□□□□ 0.19
PEX1O43933 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 AC148477.8-201ENST00000624298 468 ntBASIC16.22■□□□□ 0.19
PEX1O43933 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.22■□□□□ 0.19
PEX1O43933 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PEX1O43933 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.22■□□□□ 0.19
PEX1O43933 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.21■□□□□ 0.19
PEX1O43933 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.21■□□□□ 0.19
PEX1O43933 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.21■□□□□ 0.19
PEX1O43933 AC063926.3-201ENST00000624734 5658 ntBASIC16.21■□□□□ 0.19
PEX1O43933 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.21■□□□□ 0.19
PEX1O43933 AC093909.1-201ENST00000504731 1122 ntBASIC16.21■□□□□ 0.19
PEX1O43933 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.21■□□□□ 0.19
PEX1O43933 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.21■□□□□ 0.19
PEX1O43933 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.21■□□□□ 0.19
PEX1O43933 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
PEX1O43933 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PEX1O43933 ALOX12P2-203ENST00000570921 1945 ntBASIC16.21■□□□□ 0.19
PEX1O43933 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PEX1O43933 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PEX1O43933 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PEX1O43933 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.21■□□□□ 0.18
PEX1O43933 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.21■□□□□ 0.18
PEX1O43933 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.2■□□□□ 0.18
PEX1O43933 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.2■□□□□ 0.18
PEX1O43933 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PEX1O43933 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 AL590627.1-203ENST00000421194 1026 ntBASIC16.2■□□□□ 0.18
PEX1O43933 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.2■□□□□ 0.18
PEX1O43933 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PEX1O43933 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.2■□□□□ 0.18
PEX1O43933 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.2■□□□□ 0.18
PEX1O43933 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PEX1O43933 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms