Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.43□□□□□ -0.1
XRCC2O43543 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.43□□□□□ -0.1
XRCC2O43543 FAM185BP-201ENST00000443595 716 ntBASIC14.43□□□□□ -0.1
XRCC2O43543 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.43□□□□□ -0.1
XRCC2O43543 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.43□□□□□ -0.1
XRCC2O43543 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
XRCC2O43543 OR7E47P-204ENST00000575924 449 ntBASIC14.43□□□□□ -0.1
XRCC2O43543 MIR4515-201ENST00000584082 81 ntBASIC14.43□□□□□ -0.1
XRCC2O43543 AC116407.3-201ENST00000623905 1129 ntBASIC14.43□□□□□ -0.1
XRCC2O43543 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
XRCC2O43543 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
XRCC2O43543 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.43□□□□□ -0.1
XRCC2O43543 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.43□□□□□ -0.1
XRCC2O43543 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
XRCC2O43543 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
XRCC2O43543 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
XRCC2O43543 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 AC006449.5-201ENST00000610658 2098 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 MRPL3P1-201ENST00000400109 1033 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 CRYGEP-201ENST00000412192 528 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
XRCC2O43543 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
XRCC2O43543 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.42□□□□□ -0.1
XRCC2O43543 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.42□□□□□ -0.1
XRCC2O43543 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 AL049840.3-201ENST00000602669 611 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 AC020765.3-201ENST00000613051 740 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.42□□□□□ -0.1
XRCC2O43543 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.42□□□□□ -0.1
XRCC2O43543 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 ALOX12P2-203ENST00000570921 1945 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 GPAA1P2-202ENST00000606848 1787 ntBASIC14.42□□□□□ -0.1
XRCC2O43543 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
XRCC2O43543 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
XRCC2O43543 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.42□□□□□ -0.1
XRCC2O43543 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
XRCC2O43543 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.41□□□□□ -0.1
XRCC2O43543 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
XRCC2O43543 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.41□□□□□ -0.1
XRCC2O43543 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
XRCC2O43543 AC132872.4-202ENST00000622924 2756 ntBASIC14.41□□□□□ -0.1
XRCC2O43543 GGT4P-201ENST00000623672 1708 ntBASIC14.41□□□□□ -0.1
XRCC2O43543 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
XRCC2O43543 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.41□□□□□ -0.1
XRCC2O43543 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
XRCC2O43543 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms