Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 LINC00982-205ENST00000420957 435 ntBASIC14.38□□□□□ -0.11
PHF1O43189 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 BCRP1-201ENST00000444246 691 ntBASIC14.38□□□□□ -0.11
PHF1O43189 KRT18P2-201ENST00000447938 1258 ntBASIC14.38□□□□□ -0.11
PHF1O43189 HLA-J-202ENST00000469281 1241 ntBASIC14.38□□□□□ -0.11
PHF1O43189 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.38□□□□□ -0.11
PHF1O43189 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.38□□□□□ -0.11
PHF1O43189 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.38□□□□□ -0.11
PHF1O43189 PGM5P2-202ENST00000637225 1043 ntBASIC14.38□□□□□ -0.11
PHF1O43189 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 TSPY26P-202ENST00000565928 3884 ntBASIC14.38□□□□□ -0.11
PHF1O43189 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 AC092171.3-201ENST00000610122 2651 ntBASIC14.37□□□□□ -0.11
PHF1O43189 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.37□□□□□ -0.11
PHF1O43189 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.37□□□□□ -0.11
PHF1O43189 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.37□□□□□ -0.11
PHF1O43189 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.37□□□□□ -0.11
PHF1O43189 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 AL078644.1-201ENST00000609881 752 ntBASIC14.37□□□□□ -0.11
PHF1O43189 AC093028.1-201ENST00000622998 982 ntBASIC14.37□□□□□ -0.11
PHF1O43189 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PHF1O43189 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PHF1O43189 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PHF1O43189 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.36□□□□□ -0.11
PHF1O43189 AC078925.2-201ENST00000624013 1973 ntBASIC14.36□□□□□ -0.11
PHF1O43189 AL135999.2-201ENST00000622438 1686 ntBASIC14.36□□□□□ -0.11
PHF1O43189 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PHF1O43189 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PHF1O43189 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PHF1O43189 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.36□□□□□ -0.11
PHF1O43189 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PHF1O43189 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms