Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PIK3C2AO00443 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PIK3C2AO00443 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PIK3C2AO00443 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PIK3C2AO00443 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.77■■□□□ 1.07
PIK3C2AO00443 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PIK3C2AO00443 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
PIK3C2AO00443 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 NSL1-201ENST00000366976 722 ntTSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 AL442647.2-201ENST00000429864 857 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 TARDBPP1-201ENST00000442013 1203 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 BNIP3P42-201ENST00000454982 569 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 BNIP3P29-201ENST00000598302 571 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 AC011447.5-201ENST00000616168 564 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 LINC01144-201ENST00000626198 1710 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 KRT8P37-201ENST00000451609 1420 ntBASIC21.76■■□□□ 1.07
PIK3C2AO00443 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PIK3C2AO00443 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.76■■□□□ 1.07
PIK3C2AO00443 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AP005482.1-201ENST00000563722 1273 ntBASIC21.75■■□□□ 1.07
PIK3C2AO00443 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 KRT18P64-201ENST00000434946 1219 ntBASIC21.75■■□□□ 1.07
PIK3C2AO00443 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 MFF-223ENST00000524634 647 ntTSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 AL606495.2-201ENST00000605867 535 ntBASIC21.75■■□□□ 1.07
PIK3C2AO00443 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PIK3C2AO00443 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PIK3C2AO00443 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PIK3C2AO00443 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PIK3C2AO00443 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 AL162726.2-201ENST00000438986 1017 ntBASIC21.74■■□□□ 1.07
PIK3C2AO00443 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.74■■□□□ 1.07
PIK3C2AO00443 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PIK3C2AO00443 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PIK3C2AO00443 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.73■■□□□ 1.07
PIK3C2AO00443 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms