Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC7O00311 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC7O00311 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC7O00311 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC7O00311 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.25■□□□□ 0.19
CDC7O00311 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDC7O00311 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.25■□□□□ 0.19
CDC7O00311 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC7O00311 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.25■□□□□ 0.19
CDC7O00311 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDC7O00311 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC7O00311 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC7O00311 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC7O00311 POU5F1P6-201ENST00000466990 990 ntBASIC16.24■□□□□ 0.19
CDC7O00311 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC7O00311 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC7O00311 AL031432.2-201ENST00000566714 459 ntBASIC16.24■□□□□ 0.19
CDC7O00311 AL928711.1-201ENST00000570165 459 ntBASIC16.24■□□□□ 0.19
CDC7O00311 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.24■□□□□ 0.19
CDC7O00311 AL031055.1-201ENST00000606362 631 ntBASIC16.24■□□□□ 0.19
CDC7O00311 Z83851.2-201ENST00000609564 659 ntBASIC16.24■□□□□ 0.19
CDC7O00311 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 AC020765.3-201ENST00000613051 740 ntBASIC16.24■□□□□ 0.19
CDC7O00311 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.24■□□□□ 0.19
CDC7O00311 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
CDC7O00311 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.24■□□□□ 0.19
CDC7O00311 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CDC7O00311 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDC7O00311 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDC7O00311 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CDC7O00311 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDC7O00311 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDC7O00311 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.23■□□□□ 0.19
CDC7O00311 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms