Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC023141.13-201ENST00000604991 943 ntBASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6-TRIM34B2RNG4 BCAR1-209ENST00000546196 1340 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 PCGF3-213ENST00000620529 1899 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AL031055.1-201ENST00000606362 631 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC004877.2-201ENST00000623941 599 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 AC007064.4-201ENST00000637740 555 ntBASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6-TRIM34B2RNG4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.27■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 RNU1-129P-201ENST00000384064 167 ntBASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 U1.21-201ENST00000580816 167 ntBASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 AC025580.3-201ENST00000617932 1424 ntBASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM6-TRIM34B2RNG4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM6-TRIM34B2RNG4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms