Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 C1QBPP1-201ENST00000400117 770 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AC093433.1-201ENST00000458048 571 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 IMP3P2-201ENST00000489760 475 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AC026740.1-201ENST00000607068 791 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 AC006277.1-201ENST00000624348 1610 ntBASIC18.92■□□□□ 0.62
TMEM88BA6NKF7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 AC104982.3-201ENST00000581995 514 ntBASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM88BA6NKF7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 AC013467.2-201ENST00000605472 835 ntBASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 AHCYP2-201ENST00000430630 1300 ntBASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM88BA6NKF7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM88BA6NKF7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MAGEA5-201ENST00000446757 942 ntBASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 TSACC-208ENST00000481479 741 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 AC120045.2-201ENST00000567334 178 ntBASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 GNRHR2-203ENST00000581100 1187 ntBASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM88BA6NKF7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms