Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 HYMAI.1-201ENST00000620949 238 ntBASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 AC006277.1-201ENST00000624348 1610 ntBASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 AC148477.5-201ENST00000625164 1645 ntBASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
MEIS3P1A6NDR6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 REXO1L8P-201ENST00000604378 1897 ntBASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 AD001527.2-201ENST00000622994 785 ntBASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
MEIS3P1A6NDR6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 KRT8P49-201ENST00000604166 1432 ntBASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 SPDYE13P-201ENST00000445314 798 ntBASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 IGHV3-41-201ENST00000613121 348 ntBASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms