Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
HFM1A2PYH4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 AC022144.1-201ENST00000602255 1580 ntBASIC24.17■■□□□ 1.46
HFM1A2PYH4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
HFM1A2PYH4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 HIST3H2BA-201ENST00000436555 524 ntBASIC24.17■■□□□ 1.46
HFM1A2PYH4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HFM1A2PYH4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
HFM1A2PYH4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC24.17■■□□□ 1.46
HFM1A2PYH4 AC004790.1-201ENST00000612686 536 ntBASIC24.17■■□□□ 1.46
HFM1A2PYH4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
HFM1A2PYH4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 AC006449.6-201ENST00000612330 2296 ntBASIC24.16■■□□□ 1.46
HFM1A2PYH4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 AC009407.1-201ENST00000568958 598 ntBASIC24.16■■□□□ 1.46
HFM1A2PYH4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC24.16■■□□□ 1.46
HFM1A2PYH4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC24.16■■□□□ 1.46
HFM1A2PYH4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
HFM1A2PYH4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC24.15■■□□□ 1.46
HFM1A2PYH4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 FAM207CP-201ENST00000443486 507 ntBASIC24.15■■□□□ 1.46
HFM1A2PYH4 HNRNPA3P5-201ENST00000455201 833 ntBASIC24.15■■□□□ 1.46
HFM1A2PYH4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 AC008738.7-201ENST00000609744 511 ntBASIC24.15■■□□□ 1.46
HFM1A2PYH4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
HFM1A2PYH4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
HFM1A2PYH4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
HFM1A2PYH4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.14■■□□□ 1.46
HFM1A2PYH4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
HFM1A2PYH4 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC24.14■■□□□ 1.46
HFM1A2PYH4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
HFM1A2PYH4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
HFM1A2PYH4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
HFM1A2PYH4 AC004840.1-201ENST00000636359 365 ntBASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms