Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 MIR648-201ENST00000385046 94 ntBASIC14.44□□□□□ -0.1
SHISA3A0PJX4 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 RCN1P2-201ENST00000398357 915 ntBASIC14.44□□□□□ -0.1
SHISA3A0PJX4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 BNIP3P18-201ENST00000593976 575 ntBASIC14.44□□□□□ -0.1
SHISA3A0PJX4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.44□□□□□ -0.1
SHISA3A0PJX4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHISA3A0PJX4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 KRT8P26-201ENST00000534154 1276 ntBASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 AC012306.2-201ENST00000609350 630 ntBASIC14.43□□□□□ -0.1
SHISA3A0PJX4 AC073592.4-201ENST00000623827 446 ntBASIC14.43□□□□□ -0.1
SHISA3A0PJX4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 CICP13-201ENST00000422015 2789 ntBASIC14.43□□□□□ -0.1
SHISA3A0PJX4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.43□□□□□ -0.1
SHISA3A0PJX4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms