Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 REXO1L3P-201ENST00000622202 1288 ntBASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AF228730.7-201ENST00000641842 219 ntBASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC023157.3-201ENST00000619086 2088 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 GGT4P-201ENST00000623672 1708 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC139887.3-201ENST00000568585 713 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC091167.2-201ENST00000579581 588 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 PPT1-215ENST00000641471 2368 ntBASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV6-7A0A0A0MS04 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV6-7A0A0A0MS04 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms