Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SPDYE11-202ENST00000450699 704 ntBASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SPDYE9P-201ENST00000570642 692 ntBASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SPDYE10P-202ENST00000612005 668 ntBASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SPDYE8P-202ENST00000612377 668 ntBASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA3Q9Y5H0 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 DOC2GP-204ENST00000639052 2548 ntBASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 PCDHA14-201ENST00000506751 2298 ntBASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 AKAP8P1-201ENST00000434743 1349 ntBASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGA3Q9Y5H0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 AC005412.3-201ENST00000580309 715 ntBASIC16.15■□□□□ 0.18
PCDHGA3Q9Y5H0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms